B-Store

Author:Kyle M. Douglass Contact:kyle.m.douglass@gmail.com organization:École Polytechnique Fédérale de Lausanne (EPFL) revision:$Revision: 3 $ date:2017-01-24

Lightweight database management and analysis tools for single molecule microscopy.

Using B-Store

• Quick Start
  • Installation
  • Getting Started
  • Build a HDF Datastore with the GUI
  • Programming with B-Store
  • Getting Help
• B-Store Datastores
  • Introduction to B-Store Datastores
  • Datasets
  • HDF Datastores
• Analysis Routines in B-Store
  • Analyzing SMLM Experiments with B-Store
  • Processing Localizations and other Data
  • Performing Analyses Outside of B-Store
• File I/O
  • I/O in B-Store
  • Code Examples for Custom Parsers/Readers
• Using B-Store with Other Software
  • ImageJ and Fiji
• Frequently Asked Questions
  • What is B-Store?
  • How do I use B-Store?
  • How do I contribute to or extend B-Store?
  • Gotcha’s
  • What is single molecule localization microscopy (SMLM)?
  • What does the “B” stand for?
• Acknowledgments
  • Authors
  • People
  • Organizations
  • Software

Programming

• Module Index

Misc.

• Index
• Search Page